BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022D10SP1|AL427899
(1021 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig283 1659 0.0
3x_Contig979 171 3e-42
>3x_Contig283
Length = 1176
Score = 1659 bits (836), Expect = 0.0
Identities = 847/850 (99%), Gaps = 1/850 (0%)
Strand = Plus / Minus
Query: 1 aattctcwattctctgatactattgaagctatgaaattcttggatggttatgagcaaatg 60
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 aattctcagttctctgatactattgaagctatgaaattcttggatggttatgagcaaatg 791
Query: 61 gagttctattccaaatacaaactttcgacttcacattctcaagaacctttgaaatctata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gagttctattccaaatacaaactttcgacttcacattctcaagaacctttgaaatctata 731
Query: 121 caaaagcttaaggtagatcaccactctacccatcaggatgaattggattgcattaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 caaaagcttaaggtagatcaccactctacccatcaggatgaattggattgcattaaagaa 671
Query: 181 gaagacccaatgacagatacgttagcgaattcaaaggcttataacgcggag-aagatgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 670 gaagacccaatgacagatacgttagcgaattcaaaggcttataacgcggagcaagatgct 611
Query: 240 agtatgctttacttcttacaaaaacatgctctgactaagaaccctggttcgaaacttggc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agtatgctttacttcttacaaaaacatgctctgactaagaaccctggttcgaaacttggc 551
Query: 300 gatttgccaatcgatctcgatgattcgttgccctcgtcattgctgttgaaactcagcgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gatttgccaatcgatctcgatgattcgttgccctcgtcattgctgttgaaactcagcgaa 491
Query: 360 gatgacgaaaattcttttatgaacttaaatttgaatagcatagatccagacgatccttta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gatgacgaaaattcttttatgaacttaaatttgaatagcatagatccagacgatccttta 431
Query: 420 agtgaacatgttaatgatacaccgtttgtagcaccaacactagaagaattaatggaagaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agtgaacatgttaatgatacaccgtttgtagcaccaacactagaagaattaatggaagaa 371
Query: 480 caagacgacaaggattcaaagttgttaggtcctgaaaacactgaacaagatatggacctt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caagacgacaaggattcaaagttgttaggtcctgaaaacactgaacaagatatggacctt 311
Query: 540 ctcaagatgggtatctttttctcggactaacactttcttattctgcatattacaatcgct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctcaagatgggtatctttttctcggactaacactttcttattctgcatattacaatcgct 251
Query: 600 aaactctgcttttgtttctagtgttctacaaaaaagcatatacgtgagctttgttgacca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaactctgcttttgtttctagtgttctacaaaaaagcatatacgtgagctttgttgacca 191
Query: 660 aaggctgaaatttagtaacatttcggatatcgtgttaattttgtcatattccattctaat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aaggctgaaatttagtaacatttcggatatcgtgttaattttgtcatattccattctaat 131
Query: 720 ctgttgctgttatcttttgccgcaacatgtgcttactttcattccacccttacattttca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ctgttgctgttatcttttgccgcaacatgtgcttactttcattccacccttacattttca 71
Query: 780 attccaagttgtagtcagccttattgtttcccatcctttctttgacgatttgtcaattat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 attccaagttgtagtcagccttattgtttcccatcctttctttgacgatttgtcaattat 11
Query: 840 gttatccccg 849
||||||||||
Sbjct: 10 gttatccccg 1
>3x_Contig979
Length = 3913
Score = 171 bits (86), Expect = 3e-42
Identities = 100/104 (96%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 919 tttaatgaccccttccaacgattccaatgacaataatgttttaacgacacaataatttac 978
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3913 tttaatgaccccttccaacgatgccaatgacaataatgttttaacgacacaataatttac 3854
Query: 979 ctttatta-ccaccgattttttttattattawtattattattat 1021
|||||||| |||||||||||||||||||| | ||||||||||||
Sbjct: 3853 ctttattacccaccgattttttttattatgattattattattat 3810
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9101
Number of Sequences: 1807
Number of extensions: 9101
Number of successful extensions: 222
Number of sequences better than 1.0e-20: 2
length of query: 1021
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1005
effective length of database: 10,329,639
effective search space: 10381287195
effective search space used: 10381287195
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)